BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014G12LP1|AL426739
(752 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1251 1448 0.0
>3x_Contig1251
Length = 6331
Score = 1448 bits (730), Expect = 0.0
Identities = 747/753 (99%), Gaps = 1/753 (0%)
Strand = Plus / Plus
Query: 1 gatcttgatat-cgttattatatgtttgagcttttgaaagctttggactactgccattcg 59
||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 4230 gatcttgatattcgttattatatgttcgagcttttgaaagctttggactactgccattcg 4289
Query: 60 atgggtattatgcatagagacgtcaaaccacacaatgtaatgattgaccataagcaacac 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4290 atgggtattatgcatagagacgtcaaaccacacaatgtaatgattgaccataagcaacac 4349
Query: 120 aaattgagactaatcgattggggtttggctgaattttatcatccatcgatggaatacaat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4350 aaattgagactaatcgattggggtttggctgaattttatcatccatcgatggaatacaat 4409
Query: 180 gtccgcgttgcgtcaagatttttcaagggcccagaacttctagttgattatagaatgtac 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4410 gtccgcgttgcgtcaagatttttcaagggcccagaacttctagttgattatagaatgtac 4469
Query: 240 gattactcgctagacttatggtcatttggagcaatgttagcatcaatggtttttctgaaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4470 gattactcgctagacttatggtcatttggagcaatgttagcatcaatggtttttctgaaa 4529
Query: 300 gagcctttcttctatgggtcgagtaatactgaccagctagtcaagattgtacgcgtcttg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4530 gagcctttcttctatgggtcgagtaatactgaccagctagtcaagattgtacgcgtcttg 4589
Query: 360 ggtagtgatgatttcgaaagatatttacagaaatatcagataacactcccagatgagttt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4590 ggtagtgatgatttcgaaagatatttacagaaatatcagataacactcccagatgagttt 4649
Query: 420 attgatatggatcaatacatcagaagaccatggcagaaattcgtcaatgattccaacaag 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4650 attgatatggatcaatacatcagaagaccatggcagaaattcgtcaatgattccaacaag 4709
Query: 480 cacctatgtggaaacgatgatatcattgatttaatcgataatcttcttcgttacgaccat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4710 cacctatgtggaaacgatgatatcattgatttaatcgataatcttcttcgttacgaccat 4769
Query: 540 caagaaagattttcttgtaaagaagctatggctcatccatggtttgctccaattagaaac 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4770 caagaaagattttcttgtaaagaagctatggctcatccatggtttgctccaattagaaac 4829
Query: 600 aacgaatacacattataaccgttccatagatcaatatttttatgnagttaataataataa 659
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 4830 aacgaatacacattataaccgttccatagatcaatatttttatgaagttaataataataa 4889
Query: 660 taatactaataacaactgtgtgngcnttcctataataagtgttggaggatatattttgat 719
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 4890 taatactaataacaactgtgtgagctttcctataataagtgttggaggatatattttgat 4949
Query: 720 cgggtgcttctaaatctamgaatttattattga 752
|||||||||||||||||| ||||||||||||||
Sbjct: 4950 cgggtgcttctaaatctacgaatttattattga 4982
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6903
Number of Sequences: 1807
Number of extensions: 6903
Number of successful extensions: 290
Number of sequences better than 1.0e-20: 1
length of query: 752
length of database: 10,358,551
effective HSP length: 16
effective length of query: 736
effective length of database: 10,329,639
effective search space: 7602614304
effective search space used: 7602614304
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)